PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009768616.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 431aa    MW: 48199.9 Da    PI: 4.2705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009768616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-194998255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_009768616.1 49 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
                    789******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.32E-3148105No hitNo description
SuperFamilySSF541712.81E-1949107IPR016177DNA-binding domain
SMARTSM003801.2E-3649112IPR001471AP2/ERF domain
PfamPF008471.1E-134998IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-2749105IPR001471AP2/ERF domain
PROSITE profilePS5103219.55949106IPR001471AP2/ERF domain
PRINTSPR003676.6E-85061IPR001471AP2/ERF domain
PRINTSPR003676.6E-87288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MARKRRASEG LGENKTRDDD QAGNAAWEEM VKEAAAAAAL GGARRARKRF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPSSS SSSSTPALPS  120
KITNLLLNRL KARNNSLAAA AAAASSSDSS APVEIRDQDK QLEEYRDETA YFSDSQFMEY  180
LKDPEDQITD NSMNTNTSAI AMNNFTNTLE ACLTENDYSV VQPVMKSDEI NWSGGEINNN  240
PVEEDAQEEE ESEEENDSTD IGDVEPIDFH FVDEIESSCY YSPFEIAEEI NSADTMDQLG  300
MVYGDESLMI SEAMRRMNYE RKFSASLYAF NGISECLKLK LKSGGVMQRE RSEQLSRLRN  360
ACKRNRKEEE EDEKKINEEG IGTKMGERKE TECSSQSSSE TGQSSLSEIT YESELSLWSS  420
IDLPPICAFF T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768616.10.0PREDICTED: ethylene-responsive transcription factor RAP2-12-like
RefseqXP_016469958.10.0PREDICTED: ethylene-responsive transcription factor RAP2-12-like
TrEMBLM0ZLL20.0M0ZLL2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000034030.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21related to AP2 11